Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916797.1_cds_XP_016466476.1_59324
CDS Infomation

[gene=LOC107789214] [db_xref=GeneID:107789214] [protein=protein FRIGIDA-like] [protein_id=XP_016466476.1] [location=complement(join(10528..11355,11450..11625,14970..15630))] [gbkey=CDS]
Sequence

ATGGAGAATCTGGCTGGTCCAGCCGCGACCCCAACCTCCACCGCCACCAAGCCTCAGACG
GCTGACACCACCACCCCATCACCGGCGTCACCACCGGCAGCCCCCGAAGAAAAAGACTCA
AAAATACCACCTCCAAATCCACAGCTCGAAAACCTCTGCAAGACGATGTGCGGCAAGGGA
CTTCGAACTTACATAACATCGCAACTCCCACTTCCAGAGCAAGAAAACACACTGCGCGAA
CAACTCCCAGAGGCATTAAAGCTTGCGCCCAACGCAGCAAAGCTTGTACTCAGCTGTATG
GGAGACTTTTATGCCAAAAGGGGCAAAGATCTTAATAAGGATACGCAGATGATTTCCTAT
AGGGAAGCATCCGCATTGGTTTTGGAGTGCTTTTTATTAATGGGTTTGGACGAAATTGAT
GAAGCAGTCTCAAAAGAAGCTGAACAAGCAGCGGTTATATGGAGAAGAAGGTTGGTTGAT
GAACGAGGTATAAAAAAGGCGAGTGAAATGGACGCGCGGGGGCTGTTATTGCTTATTGGG
TGTTTTGGGATTCCACAAGTTTTTAGGAATGAGGATGTTAGGGACTTGATTCGGAAGAGT
AACATCAGGGGGATTAAAAGTGCACTTAGGAGATCAAATGTGCTCATCGAAAAGATTCCA
GAAATAATAGAGGGCATGGTGAAGCATAAGATGGAAGTTGAGGCTGTTGATGTTGCTTAT
ACTTTTGGCGTTGAGGAAAAGATTAGCCCTTACACAATTTTGTCATCGTTTTTACATGAA
TTTAAAGAATCGCTGAAGAAAAGGAAATGGAAATCGCATGGTTCACATGATGTTGTGAAT
GAAGCAAACAAGAGGGAATTGTCTACTATGAAATCTGTCATCGAATGTTTGGAAGCCCAT
AACATTGATCCCTCAAAGCTTATTCCACGGTTTCGTATCAGTGACAGAATTGAGAGCTTG
GAGAAAAAAATAGCTAGGAATGATCAAAGAAGGGAGAAGATGGTGCAGAATTGGAAATGT
GATGAAACGGGGTTTTCTAGAAGGTTCGATGACAGACAAGCAAAGCGCAGACGTATTGCA
GGTTCGGAACAGCAAAGAGCTGTTAATCACGTCTATAGCCAGAGACCCTTGTTAGAAGGT
GGAACTGCCGGCCGCTTTTATGGTTATTCTTTGTCACCACCAGCATTGCCTGGACCTATT
GCTGGCTCGATAGCTGATACTGTTCCTGGCTCACTAGCTGCAAGTGGGGGAGGTGTGGTT
ATGGGTAGATTTGGTTCAGGTATAACAAGAAGCACGGATAATGTTCTACAAGCTGGCTCA
TATGCTGGATTTCATGGAGGGATGCCGATTGATGGTAGAGCCGGGCAAGCAAGAAGTTAT
AACAATAAATTATATGGATGGCAAGGGGATGCATCCATGCACGAGAGGTCGGTCTCTTAC
AACTATGAATATGGGTCACCACCACCGTGGCAAGGCTCTATAGGGTTGCCAAACACTGTT
CCTGTTGGTGTCGGTCGCCAGAGCTCTGCTTCTGATCCTTATCAGTTGCCCAATACTGTT
CCAGGAAGTGCACCGTATCGGAACAGCGGTTCATATGCAGTAGGTGCTGTTCCCTCTGTT
AACCATCGTTCTTCCTACTTGTACCCAAGGACATATTATCCCTAA

Peptide Sequence

PEP ID

XP_016466476.1
PEP Infomation

PREDICTED: protein FRIGIDA-like [Nicotiana tabacum]
Sequence

MENLAGPAATPTSTATKPQTADTTTPSPASPPAAPEEKDSKIPPPNPQLENLCKTMCGKG
LRTYITSQLPLPEQENTLREQLPEALKLAPNAAKLVLSCMGDFYAKRGKDLNKDTQMISY
REASALVLECFLLMGLDEIDEAVSKEAEQAAVIWRRRLVDERGIKKASEMDARGLLLLIG
CFGIPQVFRNEDVRDLIRKSNIRGIKSALRRSNVLIEKIPEIIEGMVKHKMEVEAVDVAY
TFGVEEKISPYTILSSFLHEFKESLKKRKWKSHGSHDVVNEANKRELSTMKSVIECLEAH
NIDPSKLIPRFRISDRIESLEKKIARNDQRREKMVQNWKCDETGFSRRFDDRQAKRRRIA
GSEQQRAVNHVYSQRPLLEGGTAGRFYGYSLSPPALPGPIAGSIADTVPGSLAASGGGVV
MGRFGSGITRSTDNVLQAGSYAGFHGGMPIDGRAGQARSYNNKLYGWQGDASMHERSVSY
NYEYGSPPPWQGSIGLPNTVPVGVGRQSSASDPYQLPNTVPGSAPYRNSGSYAVGAVPSV
NHRSSYLYPRTYYP

Transcript Sequence

Gene sequence data has not been registered.